Border Environmental Health Initiative Contaminants in Biota

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Metadata:


Identification_Information:
Citation:
Citation_Information:
Originator: U.S. Geological Survey
Originator: Texas A&M University
Publication_Date: 2007
Title: Border Environmental Health Initiative Contaminants in Biota
Geospatial_Data_Presentation_Form: vector digital data
Online_Linkage: <http://borderhealth.cr.usgs.gov/>
Online_Linkage: <http://borderhealth.cr.usgs.gov/datalayers.html>
Online_Linkage: <http://gisdata.usgs.net/website/BorderHealth/viewer.php>
Description:
Abstract:
The Contaminants in Biota dataset was developed by the U.S. Geological Survey's Border Environmental Health Initiative (<http://borderhealth.cr.usgs.gov/index.html>). This geodatabase documents results found in published literature. These results include the location, type, and level of contaminants found in samples of a variety of animals, sediment, and water along the U.S.-Mexico border. The geodatabase consists of a site feature class that is related to sample, result and bibliographic reference tables. Domains for units, tissue type, bibliographic references, and parameters are integrated into the geodatabase but are also provided as look up tables.

International borders politically divide the landscape but rarely represent barriers for environmental issues. The major issues surrounding the U.S.-Mexico border involve economics and population growth that present challenges to environmental management and natural resource planning. To monitor trends and analyze the stresses to the environment, binationally integrated baseline datasets that portray the status of the landscape are needed. The primary objective of this project is to develop integrated, environmental resource and human health datasets for display and further analysis within a geographic information system (GIS) framework.

Datasets created for the Border Environmental Health Initiative (BEHI) follow watershed boundaries as defined by Woodward and Durall (1996). As part of the U.S.-Mexico Border Field Coordinating Committee Issues Team, Woodward and Durall used surface-water drainage basins as the primary basis for defining and delineating the extent of the border area from a shared-water resources perspective. In order to provide integrated datasets in the border region, local and regional BEHI datasets have been clipped to this boundary.

Interpretation of Environmental Contaminant Values This database contains an extensive number of values for contaminant concentrations in biota, water, and sediments. The significance of these values must be evaluated relative to established reference values, some of which have regulatory and/or legal implications. Such an undertaking is not trivial as there are many laws and regulations that deal with contaminants in the environment. In addition, the results of past and on-going research have contributed to an extensive body of knowledge concerning the toxicological and ecological significance of environmental contaminants. Thus, it would be impossible within the context of this project to adequately describe the significance of each particular contaminant concentration and the ways in which it can be interpreted.

However, the following discussion attempts to provide a broad overview of the topic and directs the user to various sources for more detailed information. The intended use of a chemical will determine the authorities under which it is regulated. The registration and use of pesticides are regulated by the US EPA under the Federal Insecticide, Fungicide, and Rodenticide Act [1]. Chemicals used for general industrial use, and some household uses, are regulated by the US EPA under the Toxic Substances Control Act [2]. Chemicals used as food additives, drugs, or in cosmetics are generally regulated by the US FDA under the Food, Drug, and Cosmetics Act [3]. Incidental contaminants (such as those chemicals that may be byproducts of manufacture without an actual intended use) may fall under any of a number of alternative legal processes that deal with pollution including the Clean Water Act [4], or the Natural Resources Damage Assessment and Remediation Process [5].

Regulatory threshold values for a given contaminant differ depending on the environmental compartment (such as biota, water, sediment.) in which it occurs. Moreover, a particular contaminant may be regulated by federal, state, and often local entities, all of which may establish slightly different criteria as action levels. For example reference values for waterborne contaminants are promulgated as National Water Quality Criteria established by the US EPA [6] and are generally enforced as state water quality standards [7]. Furthermore, the allowable level may be different depending upon the designated use of the water body [8]. The same contaminant in fish tissue may be subject to regulation by the US FDA as an action level [9] and/or may result in a fish consumption advisory issued by a state's department of natural resources, public health department, or fish and game commission [10]. Local recommendations may also apply. Contaminant levels in other types of biota (birds, invertebrates, mammals, amphibians, reptiles) may fall under similar regulations if they serve as human food sources, but more often those values are interpreted in terms of their toxicological significance to the organism itself and to other wildlife that may prey upon them. Ecological considerations such as these are often of interest to the U.S. Fish and Wildlife Service [11] and state departments of fish and game. Finally, special considerations may apply to endangered species [12] and to the pollution of lands held in public trust [13]. A variety of laws address the authority of various agencies to deal with contaminants in aquatic sediments [14, 15].

With such a wide range of regulations pertaining to environmental contaminants, it becomes clear that a simple table of reference values would be outside the scope of this project. As an alternative, we offer the web links noted above and those listed below as starting points for evaluating the legal, regulatory, and toxicological significance of contaminant values contained in our databases.

[1] <http://www.epa.gov/regulations/laws/fifra.html> [2] <http://www.epa.gov/regulations/laws/tsca.html> [3] <http://www.fda.gov/opacom/laws/fdcact/fdctoc.htm> [4] <http://www.epa.gov/regulations/laws/cwa.html> [5] <http://www.epa.gov/superfund/programs/nrd/primer.htm> [6] <http://www.epa.gov/waterscience/standards> [7] <http://www.tceq.state.tx.us/permitting/water_quality/wq_assessment/standards/WQ_standards_intro.html> [8] <http://www.texasep.org/html/wql/wql_1swq_stand.html> [9] <http://www.cfsan.fda.gov/~lrd/fdaact.html> [10] <http://www.tpwd.state.tx.us/publications/annual/fish/consumption_bans> [11] <http://www.fws.gov/contaminants> [12] <http://www.epa.gov/regulations/laws/esa.html> [13] <http://restoration.doi.gov> [14] <http://www.epa.gov/waterscience/cs/aboutcs> [15] <http://www.epa.gov/waterscience/cs/guidelines.htm#epa>

Other web links of interest:

Ecological Risk Assessment: <http://www.epa.gov/region5/superfund/ecology/html/screeningbench.html>

Physical and Chemical Properties: <http://chemfinder.cambridgesoft.com>

Toxic Properties: <http://www.atsdr.cdc.gov/toxpro2.html> <http://www.cerc.usgs.gov/data/acute/acute.html>

Purpose:
This dataset was created to provide resource managers, public officials, researchers, and the general public with ready access to accurate, impartial, scientific information to strike a balance among human needs for resource utilization, environmental quality, and human health.
Supplemental_Information:
Additional information about the Border Environmental Health Initiative can be found at <http://borderhealth.cr.usgs.gov> and datasets are available for viewing through an Internet Mapping Service (follow links on the main page to the Internet Mapping Service Viewer).
Time_Period_of_Content:
Time_Period_Information:
Range_of_Dates/Times:
Beginning_Date: 1965
Ending_Date: 2005
Currentness_Reference: Publication dates of the source data
Status:
Progress: Complete
Maintenance_and_Update_Frequency: Irregular
Keywords:
Theme:
Theme_Keyword_Thesaurus: Library of Congress
Theme_Keyword: Water
Theme_Keyword: Environmental Health
Theme_Keyword: Contaminants
Place:
Place_Keyword: Mexican-American Border Region
Place_Keyword: United States of America
Place_Keyword: Mexico
Place_Keyword: Rio Grande
Place_Keyword: Río Bravo
Access_Constraints:
The data are available for viewing at <http://borderhealth.cr.usgs.gov>
Use_Constraints:
There is no guarantee concerning the accuracy of the data. Users should be aware that temporal changes may have occurred since this data set was collected and that some parts of this data may no longer represent actual surface conditions. Users should not use this data for critical applications without a full awareness of its limitations. Acknowledgement of the originating agencies would be appreciated in products derived from these data. Any user who modifies the data is obligated to describe the types of modifications they perform. User specifically agrees not to misrepresent the data, nor to imply that changes made were approved or endorsed by the U.S. Geological Survey. Please refer to <http://www.usgs.gov/privacy.html> for the USGS disclaimer.
Point_of_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: U.S. Geological Survey
Contact_Person: Public Information Officer
Contact_Address:
Address_Type: mailing and physical address
Address: 8027 Exchange Dr
City: Austin
State_or_Province: Texas
Postal_Code: 78754
Country: USA
Contact_Voice_Telephone: 512-927-3500
Contact_Facsimile_Telephone: 512-927-3590
Contact_Electronic_Mail_Address: gs-w-txpublic-info@usgs.gov
Browse_Graphic:
Browse_Graphic_File_Name:
<http://borderhealth.cr.usgs.gov/images/metadata_image/contam_schema.gif>
Browse_Graphic_File_Description:
Screenshot from Microsoft Access of the tables and their relationships.
Browse_Graphic_File_Type: GIF
Data_Set_Credit:
Acknowledgment of the Border Environmental Health Initiative and (or) the U.S. Geological Survey would be appreciated in products derived from these data.

Data_Quality_Information:
Attribute_Accuracy:
Attribute_Accuracy_Report:
Attributes were either imported from another data source, or calculated based on the imported attributes. Database queries were used to ensure consitency in the calculations. Any errors in the original datasets may persist in this dataset.
Logical_Consistency_Report:
Database queries were performed to ensure the quality of this dataset. The relational integrity of the database was confirmed by ensuring that all parent records in a relationship were referencing at least one child record, and that all child records in a relationship were referencing at least one parent record. Null values were replaced with a coded value that varies with each table. While checks were done to prevent erroneous values (such as validating the matrix values versus the species the sample was obtained from), these data were imported from a variety of sources; any errors in the original dataset may persist in this dataset.
Completeness_Report:
Absence of a chemical in the database can be because of two reasons--because it was not measured, or because it was below detection limits. Non-detections have been entered with a result value of zero, and a result comment of "Non-detect" plus any detection limit information that was reported.
Positional_Accuracy:
Horizontal_Positional_Accuracy:
Horizontal_Positional_Accuracy_Report:
The horizontal accuracy of this dataset varies since locations were derived from descriptions given in the referenced literature. Some publications provided explicit geographic coordinates, whereas others only provided an approximate description (for example, 0.26 miles upstream of Main Street). The original publication should be referenced to determine the horizontal accuracy of the sampling site. Original publication information is provided in the references table, which is related to the sampling site.
Lineage:
Source_Information:
Source_Citation:
Citation_Information:
Originator: Dennis Woodward
Originator: Roger Durall
Publication_Date: 1996
Title:
United States-Mexico Border Area, as Delineated by a Shared-Water Resources Perspective
Geospatial_Data_Presentation_Form: map
Series_Information:
Series_Name: Fact Sheet 1
Publication_Information:
Publisher: U.S. Department of Interior
Online_Linkage:
<http://www.cerc.usgs.gov/FCC/pubs/Fact_sheets/Fact_1/DOI_US-MX_Border_FCC_Fact_sheet_1.html>
Source_Scale_Denominator: not applicable
Type_of_Source_Media: paper
Source_Citation_Abbreviation: Woodward and Durall (1996)
Source_Contribution:
The map included in this fact sheet served as selection criteria for whether Mexican cuencas or U.S. HUCs were included in the Border Enviornmental Health Initiative study area.
Source_Information:
Source_Citation:
Citation_Information:
Originator: Miguel Mora
Publication_Date: 2001
Title:
A geographic information system database for environmental contaminants in the Rio Grande/Rio Bravo Basin
Geospatial_Data_Presentation_Form: spreadsheet
Publication_Information:
Publication_Place:
Brazos Field Research Station, Columbia Environmental Research Center
Publisher: U.S. Geological Survey
Source_Scale_Denominator: not applicable
Type_of_Source_Media: CD-ROM
Source_Citation_Abbreviation: Mora 2001
Source_Contribution:
Data in this database were researched using scientific literature and on-line databases by biologists at Texas A&M University.
Source_Information:
Source_Citation:
Citation_Information:
Originator: Lisa H. Nowell
Originator: Paul D. Capel
Originator: Peter D. Dileanis
Publication_Date: 1999
Title:
Pesticides in Stream Sediment and Aquatic Biota: Distribution, Trends, and Governing Factors
Edition: Volume 4 of the Series
Geospatial_Data_Presentation_Form: not applicable
Series_Information:
Series_Name: Pesticides in the Hydrologic System
Publication_Information:
Publication_Place: National Water Quality Assessment Program
Publisher: U.S. Geological Survey
Source_Scale_Denominator: not applicable
Type_of_Source_Media: paper
Source_Citation_Abbreviation: Nowell and others, 1999
Source_Contribution:
Appendix E: Glossary of Common and Chemical Names of Pesticides and Related Compounds Given in Text was used to classify parameters into Contaminant Class and Contaminant Group. These classifications are documented in the dom_parameter_cd table.
Process_Step:
Process_Description:
Data from the spreadsheet contained in the "A geographic information system database for environmental contaminants in the Rio Grande/Rio Bravo Basin" publication were converted to a geodatabase.
Source_Used_Citation_Abbreviation: Mora 2001
Process_Date: 2003
Process_Contact:
Contact_Information:
Contact_Person_Primary:
Contact_Person: Miguel Mora
Contact_Organization: Texas A&M University and U.S. Geological Survey
Contact_Position: Research Wildlife Biologist
Contact_Voice_Telephone: (979)845-5775
Contact_Facsimile_Telephone: (979)845-5786
Contact_Electronic_Mail_Address: mmora@tamu.edu
Process_Step:
Process_Description:
Results from additional literature sources are added according to availability of data. Scientific articles from 1996 to present are targeted. Site, sample, result, and bibliographic reference are entered into the geodatabase. Database searches included state and federal websites, academic databases available through Texas A&M Library, and public internet sites.

The following guidelines were used while entering these data:

1. Every result found in the domain needs to be entered, if they are in the reference, even if they are ND (Non-detect) or NA (Non-Analyzed, Non-Available).

2. The number 0 will be assigned when the result is under the limit of detection, or when there was none recorded, but in both cases a clarification is needed in the result note. If it is under the limit of detection, this needs to be specified. For example: Non-detect, ND less than 0.02. If it is NA this also needs to be specified according to the case. For example, non-analyzed, or non-available.

3. Results are entered with the original units in the reference (no units should be converted).

4. Results are entered in the same format as the reference, for example, if they are single individuals (samples), or mean of a number of individuals (samples), or max and min values. (Exception: There are 20 or more single samples of the same species, and each of those has contaminants results, a mean of the 20 samples is calculated, and the max and min values are recorded in the sample notes.)

5. The result value field will only allow numerical values. If the result on the reference is presented using a "<" symbol, for example, cadmium <0.50, only the number is going to be recorded (0.50), but the entry needs to be clarified in the results note (<0.50).

6. Organochlorides, metals, and general (% of moisture, % of lipids) are entered in the same sample, if they belong to the same individual, even though they can be located in different tables in the literature.

Process_Date: 2007
Process_Step:
Process_Description:
The database underwent an initial quality control/quality assurance review. The sample results values were verified to ensure that there were no null values. Non-detection values reported in the database were verified to be reported as zero and marked as non-detects. Values were converted from text to double. Spatial accuracy was investigated to ensure sample site locations were reported as accurately as possible.
Process_Date: 02/15/2007
Process_Step:
Process_Description:
The parameter table was reviewed by a USGS toxicologist. Parameter names were updated and modified to allow for more specific results. The chemical class and contaminant group fields were populated using Nowell and others, 1999.
Source_Used_Citation_Abbreviation: Nowell and others, 1999
Process_Date: 5/2007
Process_Step:
Process_Description:
The geodatabase underwent a rigorous quality assurance and quality check. It was verified that all records in the site table were related to at least one record in the sample table, and that all records in the sample table were related to a record in the site table. This relational integrity was also verified for relationships between the sample and results tables, and between the sample and reference tables. Within the results table, no null result values, units_cd, or parameter_cd were allowed. Within the sample table, it was verified that all samples had matrix values and that the matrix value was appropriate according to the species common name. Tissue codes for water, soil, and sediment were calculated to 99 (not applicable). Tissue codes for bird, fish, herp, invertebrate, or mammal with null values were calculated to 999 (unspecified). Within the site table, the xcoord and ycoord values were calculated in decimal degrees, NAD 83.
Process_Date: 7/2007
Process_Step:
Process_Description:
A data dictionary was created. The data dictionary defines each field in each table (with data type and description), and it provides a visual of the relationships maintained within the geodatabase. The data dictionary will be available from the BEHI Data download page <http://borderhealth.cr.usgs.gov/datalayers.html> along with the metadata and geodatabase.
Process_Date: 7/2007

Distribution_Information:
Distributor:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: U.S. Geological Survey
Contact_Person: Public Information Officer
Contact_Address:
Address_Type: mailing and physical address
Address: 8027 Exchange Dr
City: Austin
State_or_Province: Texas
Postal_Code: 78754
Country: USA
Contact_Voice_Telephone: 512-917-3500
Contact_Facsimile_Telephone: 512-927-3590
Contact_Electronic_Mail_Address: gs-w-txpublic-info@usgs.gov
Distribution_Liability:
These data have not received Director's approval and as such are provisional and subject to revision. The data are released on the condition that neither the U.S. Geological Survey, its cooperators, nor the United States Government may be held liable for any damages resulting from its authorized or unauthorized use. Although these data have been processed successfully on a computer system at the U.S. Geological Survey, no warranty expressed or implied is made regarding the accuracy or utility of the data on any other system or for general or scientific purposes, nor shall the act of distribution constitute any such warranty.

Metadata_Reference_Information:
Metadata_Date: 20070709
Metadata_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization: U.S. Geological Survey
Contact_Address:
Address_Type: mailing and physical address
Address: 8027 Exchange Dr
City: Austin
State_or_Province: Texas
Postal_Code: 78754
Country: USA
Contact_Voice_Telephone: 512-927-3500
Contact_Facsimile_Telephone: 512-927-3590
Contact_Electronic_Mail_Address: gs-w-txpublic-info@usgs.gov

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